MRIQC: individual T1w report

Summary

  • BIDS filename: sub-2056_ses-1_T1w.
  • Date and time: 2024-07-09, 02:00.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4670506293345185
cnr2.7623153417340833
efc0.6406938613894642
fber291.8212712633311
fwhmavg3.9740933333333337
fwhmx4.0621
fwhmy4.17617
fwhmz3.68401
icvscsf0.17667458729989702
icvsgm0.45080523322163096
icvswm0.372520179478472
inumed1.5573861598968506
inurange0.7719974160194398
qi11.898711344610413e-05
qi20.006117203737964434
rpvecsf33.04848443213765
rpvegm14.337409825357495
rpvewm19.582037003378186
sizex192
sizey256
sizez256
snrcsf1.5002618604692732
snrgm11.497019623495891
snrtotal10.294667212404365
snrwm17.88672015324793
snrdcsf21.621685304448395
snrdgm37.51834853599658
snrdtotal36.21585969546297
snrdwm49.50754524594392
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk2.277830798869286
summarybgmad13.23380439806482
summarybgmean37.459868272928105
summarybgmedian34.300792284309864
summarybgn2429442.0
summarybgp0516.953910425305367
summarybgp9564.16662124544382
summarybgstdv14.680995715791772
summarycsfk32.85564751676401
summarycsfmad128.5093961673716
summarycsfmean487.58676830710044
summarycsfmedian436.75967916846275
summarycsfn16920.0
summarycsfp05271.93623211979866
summarycsfp95710.006751713529
summarycsfstdv291.1136941328631
summarygmk0.4445207062109162
summarygmmad62.09067975444248
summarygmmean760.8018760912611
summarygmmedian757.8734792768955
summarygmn30991.0
summarygmp05657.9183881767094
summarygmp95874.5017869211733
summarygmstdv65.91806195701307
summarywmk0.5158410978525274
summarywmmad51.02089368562097
summarywmmean996.9341374008973
summarywmmedian1000.0561599880457
summarywmn197900.0
summarywmp05895.5818974003196
summarywmp951082.5829680036748
summarywmstdv55.91039747624281
tpmoverlapcsf0.1447395235300064
tpmoverlapgm0.4653187096118927
tpmoverlapwm0.4861568510532379
wm2max0.6271431086076396
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime13:42:14.967500
BaseResolution256
CoilCombinationMethodAdaptive Combine
CoilStringT:HEA;HEP
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber35451
DwellTime3e-06
EchoTime0.00164
FlipAngle7
ImageOrientationPatientDICOM[-0.0139622, 0.999903, 4.76698e-08, -0.104518, -0.0014594, -0.994522]
ImageOrientationTextSag>Tra(6.0)>Cor(-0.8)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.223
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressExposition Drive 1777,Boulder- 6392da-,Denver,US,80301
InstitutionNameIntermountain Neuroimaging Consortium
InstitutionalDepartmentNameDepartment
InversionTime1.2
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNameTrioTim
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages5
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps255
PhaseResolution1
PixelBandwidth651
ProcedureStepDescriptionVMITTAL^frontalsub_200007
ProtocolNamemprage_5e
PulseSequenceDetails%CustomerSeq%\tfl_mgh_multiecho
ReceiveCoilNameHeadMatrix
ReconMatrixPE256
RefLinesPE32
RepetitionTime2.53
SAR0.0615695
ScanOptionsIR
ScanningSequenceGR\IR
SequenceNametfl3d5_ns
SequenceVariantSP\MP
SeriesDescriptionmprage_5e RMS
SeriesNumber3
ShimSetting[6775, 12605, -7166, -44, 314, -274, -21, 114]
SliceThickness1
SoftwareVersionssyngo MR B17
StationNameMRC35451
TxRefAmp345.081
md5sumbb5bf40450bc9d961b1d3288a662e8bb
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.